| Welcome Address |
| 9:30 |
 |
末松 安晴 (国立情報学研究所 所長) |
|
| Opening Remarks |
| 9:35 |
|
中村桂子 (JT生命誌研究館) |
|
| session 1 from Genome to Knowledge |
| 9:45-12:00 |
|
藤山秋佐夫 (国立情報学研究所) |
 From Material to Information:Tales of Human and Chimpanzee Genomes |
|
五斗 進 (京都大学化学研究所) |
| From Genomic and Chemical Data to Knowledge |
|
中井謙太 (東京大学医科学研究所) |
| DNA Linguistics As A Future Style of Bioinformatics |
|
Peter Li (University of Newcastle upon Tyne) |
| Performing in silico experiments in biology using myGrid middleware |
|
Vivian Lee (European Bioinformatics Institute) |
| GOA: the Gene Ontology Annotation Database |
|
| 12:00-13:00 |
Break |
| session 2 Linkage between Knowledges |
| 13:00-14:00 |
|
Anand Kumar (Institute for Formal Ontology and Medical Information Science,
Saarland University) |
| Towards Realist Ontologies in Biomedical Informatics |
|
Yves Lussier (Biomedical Informatics Core, Columbia University) |
| Computational approaches to high throughput analyses of non-molecular phenotypes |
|
| session 3 from Literature to Knowledge |
| 14:00-15:00 |
|
Sophia Ananiadou (National Center for Text Mining, University of Salford) |
| The UK National Centre for Text Mining: addressing the needs of the Biomedical
community |
|
Alex Morgan (MITRE, USA) |
| Linking Text Mentions to Biological Identifiers |
|
| 15:00-15:15 |
Break |
| 15:15-17:45 |
|
Udo Hahn (Language and Information Engineering, Jena University) |
| E-NLP for E-Biology |
|
Limsoon Wong (Institute for Infocomm Research, Singapore) |
| Building Gene Networks by Information Extraction, Cleansing, & Integration |
|
Kevin B. Cohen (Center for Computational Pharmacology, University of Colorado
Health Sciences Center) |
| Corpus design for biomedical language processing |
|
Nigel Collier (国立情報学研究所) |
| Zone analysis in biology articles: Helping to find needles in the haystack |
|
辻井潤一 (東京大学大学院情報学環) |
| Logical Ontology or Thesaurus ?- From the perspectives of text mining - |
|
| 17:45 |
CLOSING |
